Welcome to Nextstrain’s documentation!

Nextstrain is an open-source project to harness the scientific and public health potential of pathogen genome data. We provide a continually-updated view of publicly available data with powerful analyses and visualizations showing pathogen evolution and epidemic spread. Our goal is to aid epidemiological understanding and improve outbreak response. If you have any questions, or simply want to say hi, please give us a shout at hello@nextstrain.org.


This site is currently only a stub, to show what’s possible with Read The Docs for an umbrella documentation project.

For the real documentation entry point, please go to nextstrain.org/docs.