augur.util_support package

Submodules

• augur.util_support.color_parser module
  • ColorParser
    • ColorParser.mapping
    • ColorParser.parse_file()
• augur.util_support.color_parser_line module
  • ColorParserLine
    • ColorParserLine.fields
    • ColorParserLine.hex_code
    • ColorParserLine.is_comment_or_blank()
    • ColorParserLine.pair()
    • ColorParserLine.trait
    • ColorParserLine.trait_value
• augur.util_support.node_data module
  • DuplicatedNonDictAttributeError
  • NodeData
    • NodeData.deep_add_or_update()
    • NodeData.update()
• augur.util_support.node_data_file module
  • NodeDataFile
    • NodeDataFile.annotations
    • NodeDataFile.branches
    • NodeDataFile.generated_by
    • NodeDataFile.is_generated_by_incompatible_augur
    • NodeDataFile.items()
    • NodeDataFile.nodes
    • NodeDataFile.validate()
  • NodeDataObject
• augur.util_support.node_data_reader module
  • NodeDataReader
    • NodeDataReader.build_node_data()
    • NodeDataReader.check_against_tree_file()
    • NodeDataReader.node_data_files
    • NodeDataReader.node_names_from_tree_file
    • NodeDataReader.read()